freebayes 1.3.1 -> 1.3.8 https://repology.org/project/freebayes/versions
attrpath: freebayes
Checking auto update branch...
No auto update branch exists
[version] 
stderr did not split as expected full stderr was: 
this derivation will be built:
  /nix/store/jhr2rxykkqdmdl7isyiqy3xbk1ixxz13-freebayes-1.3.8-src.drv
building '/nix/store/jhr2rxykkqdmdl7isyiqy3xbk1ixxz13-freebayes-1.3.8-src.drv'...
exporting https://github.com/ekg/freebayes.git (rev v1.3.8) into /nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src
Initialized empty Git repository in /nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src/.git/
remote: Enumerating objects: 229, done.
remote: Counting objects: 100% (229/229), done.
remote: Compressing objects: 100% (214/214), done.
remote: Total 229 (delta 8), reused 168 (delta 3), pack-reused 0
Receiving objects: 100% (229/229), 2.53 MiB | 4.55 MiB/s, done.
Resolving deltas: 100% (8/8), done.
From https://github.com/ekg/freebayes
 * tag               v1.3.8     -> FETCH_HEAD
Switched to a new branch 'fetchgit'
Submodule 'contrib/fastahack' (https://github.com/ekg/fastahack.git) registered for path 'contrib/fastahack'
Submodule 'contrib/multichoose' (git@github.com:vcflib/multichoose.git) registered for path 'contrib/multichoose'
Submodule 'contrib/smithwaterman' (https://github.com/ekg/smithwaterman.git) registered for path 'contrib/smithwaterman'
Submodule 'bash-tap' (https://github.com/illusori/bash-tap.git) registered for path 'test/bash-tap'
Submodule 'test/test-simple-bash' (https://github.com/ingydotnet/test-simple-bash.git) registered for path 'test/test-simple-bash'
Cloning into '/nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src/contrib/fastahack'...
remote: Enumerating objects: 23, done.        
remote: Counting objects: 100% (23/23), done.        
remote: Compressing objects: 100% (19/19), done.        
remote: Total 23 (delta 2), reused 14 (delta 2), pack-reused 0        
Receiving objects: 100% (23/23), 21.73 KiB | 767.00 KiB/s, done.
Resolving deltas: 100% (2/2), done.
Cloning into '/nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src/contrib/multichoose'...
error: cannot run ssh: No such file or directory
fatal: unable to fork
fatal: clone of 'git@github.com:vcflib/multichoose.git' into submodule path '/nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src/contrib/multichoose' failed
Failed to clone 'contrib/multichoose'. Retry scheduled
Cloning into '/nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src/contrib/multichoose'...
error: cannot run ssh: No such file or directory
fatal: unable to fork
fatal: clone of 'git@github.com:vcflib/multichoose.git' into submodule path '/nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src/contrib/multichoose' failed
Failed to clone 'contrib/multichoose' a second time, aborting
Cloning into '/nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src/test/bash-tap'...
remote: Enumerating objects: 8, done.        
remote: Counting objects: 100% (8/8), done.        
remote: Compressing objects: 100% (8/8), done.        
remote: Total 8 (delta 0), reused 2 (delta 0), pack-reused 0        
Receiving objects: 100% (8/8), 7.18 KiB | 7.18 MiB/s, done.
Cloning into '/nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src/contrib/smithwaterman'...
remote: Enumerating objects: 23, done.        
remote: Counting objects: 100% (23/23), done.        
remote: Compressing objects: 100% (22/22), done.        
remote: Total 23 (delta 0), reused 7 (delta 0), pack-reused 0        
Receiving objects: 100% (23/23), 42.75 KiB | 781.00 KiB/s, done.
Cloning into '/nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src/test/test-simple-bash'...
remote: Enumerating objects: 21, done.        
remote: Counting objects: 100% (21/21), done.        
remote: Compressing objects: 100% (16/16), done.        
remote: Total 21 (delta 1), reused 16 (delta 1), pack-reused 0        
Receiving objects: 100% (21/21), 8.00 KiB | 8.00 MiB/s, done.
Resolving deltas: 100% (1/1), done.
Cloning into '/nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src/contrib/multichoose'...
error: cannot run ssh: No such file or directory
fatal: unable to fork
fatal: clone of 'git@github.com:vcflib/multichoose.git' into submodule path '/nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src/contrib/multichoose' failed
Failed to clone 'contrib/multichoose'. Retry scheduled
Cloning into '/nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src/contrib/multichoose'...
error: cannot run ssh: No such file or directory
fatal: unable to fork
fatal: clone of 'git@github.com:vcflib/multichoose.git' into submodule path '/nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src/contrib/multichoose' failed
Failed to clone 'contrib/multichoose' a second time, aborting
error: builder for '/nix/store/jhr2rxykkqdmdl7isyiqy3xbk1ixxz13-freebayes-1.3.8-src.drv' failed with exit code 1;
       last 25 log lines:
       > remote: Total 8 (delta 0), reused 2 (delta 0), pack-reused 0
       > Receiving objects: 100% (8/8), 7.18 KiB | 7.18 MiB/s, done.
       > Cloning into '/nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src/contrib/smithwaterman'...
       > remote: Enumerating objects: 23, done.
       > remote: Counting objects: 100% (23/23), done.
       > remote: Compressing objects: 100% (22/22), done.
       > remote: Total 23 (delta 0), reused 7 (delta 0), pack-reused 0
       > Receiving objects: 100% (23/23), 42.75 KiB | 781.00 KiB/s, done.
       > Cloning into '/nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src/test/test-simple-bash'...
       > remote: Enumerating objects: 21, done.
       > remote: Counting objects: 100% (21/21), done.
       > remote: Compressing objects: 100% (16/16), done.
       > remote: Total 21 (delta 1), reused 16 (delta 1), pack-reused 0
       > Receiving objects: 100% (21/21), 8.00 KiB | 8.00 MiB/s, done.
       > Resolving deltas: 100% (1/1), done.
       > Cloning into '/nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src/contrib/multichoose'...
       > error: cannot run ssh: No such file or directory
       > fatal: unable to fork
       > fatal: clone of 'git@github.com:vcflib/multichoose.git' into submodule path '/nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src/contrib/multichoose' failed
       > Failed to clone 'contrib/multichoose'. Retry scheduled
       > Cloning into '/nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src/contrib/multichoose'...
       > error: cannot run ssh: No such file or directory
       > fatal: unable to fork
       > fatal: clone of 'git@github.com:vcflib/multichoose.git' into submodule path '/nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src/contrib/multichoose' failed
       > Failed to clone 'contrib/multichoose' a second time, aborting
       For full logs, run 'nix log /nix/store/jhr2rxykkqdmdl7isyiqy3xbk1ixxz13-freebayes-1.3.8-src.drv'.
stderr did not split as expected full stderr was: 
error: attribute 'originalSrc' in selection path 'freebayes.originalSrc' not found
stderr did not split as expected full stderr was: 
these 2 derivations will be built:
  /nix/store/jhr2rxykkqdmdl7isyiqy3xbk1ixxz13-freebayes-1.3.8-src.drv
  /nix/store/rz34aq2d02kv73d13fzsipglzp6cdl6m-freebayes-1.3.8.drv
building '/nix/store/jhr2rxykkqdmdl7isyiqy3xbk1ixxz13-freebayes-1.3.8-src.drv'...
exporting https://github.com/ekg/freebayes.git (rev v1.3.8) into /nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src
Initialized empty Git repository in /nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src/.git/
remote: Enumerating objects: 229, done.
remote: Counting objects: 100% (229/229), done.
remote: Compressing objects: 100% (214/214), done.
remote: Total 229 (delta 8), reused 168 (delta 3), pack-reused 0
Receiving objects: 100% (229/229), 2.53 MiB | 4.70 MiB/s, done.
Resolving deltas: 100% (8/8), done.
From https://github.com/ekg/freebayes
 * tag               v1.3.8     -> FETCH_HEAD
Switched to a new branch 'fetchgit'
Submodule 'contrib/fastahack' (https://github.com/ekg/fastahack.git) registered for path 'contrib/fastahack'
Submodule 'contrib/multichoose' (git@github.com:vcflib/multichoose.git) registered for path 'contrib/multichoose'
Submodule 'contrib/smithwaterman' (https://github.com/ekg/smithwaterman.git) registered for path 'contrib/smithwaterman'
Submodule 'bash-tap' (https://github.com/illusori/bash-tap.git) registered for path 'test/bash-tap'
Submodule 'test/test-simple-bash' (https://github.com/ingydotnet/test-simple-bash.git) registered for path 'test/test-simple-bash'
Cloning into '/nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src/contrib/fastahack'...
remote: Enumerating objects: 23, done.        
remote: Counting objects: 100% (23/23), done.        
remote: Compressing objects: 100% (19/19), done.        
remote: Total 23 (delta 2), reused 14 (delta 2), pack-reused 0        
Receiving objects: 100% (23/23), 21.73 KiB | 695.00 KiB/s, done.
Resolving deltas: 100% (2/2), done.
Cloning into '/nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src/contrib/multichoose'...
error: cannot run ssh: No such file or directory
fatal: unable to fork
fatal: clone of 'git@github.com:vcflib/multichoose.git' into submodule path '/nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src/contrib/multichoose' failed
Failed to clone 'contrib/multichoose'. Retry scheduled
Cloning into '/nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src/contrib/multichoose'...
error: cannot run ssh: No such file or directory
fatal: unable to fork
fatal: clone of 'git@github.com:vcflib/multichoose.git' into submodule path '/nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src/contrib/multichoose' failed
Failed to clone 'contrib/multichoose' a second time, aborting
Cloning into '/nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src/contrib/smithwaterman'...
remote: Enumerating objects: 23, done.        
remote: Counting objects: 100% (23/23), done.        
remote: Compressing objects: 100% (22/22), done.        
remote: Total 23 (delta 0), reused 7 (delta 0), pack-reused 0        
Receiving objects: 100% (23/23), 42.75 KiB | 875.00 KiB/s, done.
Cloning into '/nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src/test/bash-tap'...
remote: Enumerating objects: 8, done.        
remote: Counting objects: 100% (8/8), done.        
remote: Compressing objects: 100% (8/8), done.        
remote: Total 8 (delta 0), reused 2 (delta 0), pack-reused 0        
Receiving objects: 100% (8/8), 7.18 KiB | 7.18 MiB/s, done.
Cloning into '/nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src/test/test-simple-bash'...
remote: Enumerating objects: 21, done.        
remote: Counting objects: 100% (21/21), done.        
remote: Compressing objects: 100% (16/16), done.        
remote: Total 21 (delta 1), reused 16 (delta 1), pack-reused 0        
Receiving objects: 100% (21/21), 8.00 KiB | 8.00 MiB/s, done.
Resolving deltas: 100% (1/1), done.
Cloning into '/nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src/contrib/multichoose'...
error: cannot run ssh: No such file or directory
fatal: unable to fork
fatal: clone of 'git@github.com:vcflib/multichoose.git' into submodule path '/nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src/contrib/multichoose' failed
Failed to clone 'contrib/multichoose'. Retry scheduled
Cloning into '/nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src/contrib/multichoose'...
error: cannot run ssh: No such file or directory
fatal: unable to fork
fatal: clone of 'git@github.com:vcflib/multichoose.git' into submodule path '/nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src/contrib/multichoose' failed
Failed to clone 'contrib/multichoose' a second time, aborting
error: builder for '/nix/store/jhr2rxykkqdmdl7isyiqy3xbk1ixxz13-freebayes-1.3.8-src.drv' failed with exit code 1;
       last 25 log lines:
       > remote: Total 23 (delta 0), reused 7 (delta 0), pack-reused 0
       > Receiving objects: 100% (23/23), 42.75 KiB | 875.00 KiB/s, done.
       > Cloning into '/nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src/test/bash-tap'...
       > remote: Enumerating objects: 8, done.
       > remote: Counting objects: 100% (8/8), done.
       > remote: Compressing objects: 100% (8/8), done.
       > remote: Total 8 (delta 0), reused 2 (delta 0), pack-reused 0
       > Receiving objects: 100% (8/8), 7.18 KiB | 7.18 MiB/s, done.
       > Cloning into '/nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src/test/test-simple-bash'...
       > remote: Enumerating objects: 21, done.
       > remote: Counting objects: 100% (21/21), done.
       > remote: Compressing objects: 100% (16/16), done.
       > remote: Total 21 (delta 1), reused 16 (delta 1), pack-reused 0
       > Receiving objects: 100% (21/21), 8.00 KiB | 8.00 MiB/s, done.
       > Resolving deltas: 100% (1/1), done.
       > Cloning into '/nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src/contrib/multichoose'...
       > error: cannot run ssh: No such file or directory
       > fatal: unable to fork
       > fatal: clone of 'git@github.com:vcflib/multichoose.git' into submodule path '/nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src/contrib/multichoose' failed
       > Failed to clone 'contrib/multichoose'. Retry scheduled
       > Cloning into '/nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src/contrib/multichoose'...
       > error: cannot run ssh: No such file or directory
       > fatal: unable to fork
       > fatal: clone of 'git@github.com:vcflib/multichoose.git' into submodule path '/nix/store/hjzwxwm2nw6rkb9ahwgnm0k4gbq42bnw-freebayes-1.3.8-src/contrib/multichoose' failed
       > Failed to clone 'contrib/multichoose' a second time, aborting
       For full logs, run 'nix log /nix/store/jhr2rxykkqdmdl7isyiqy3xbk1ixxz13-freebayes-1.3.8-src.drv'.
error: 1 dependencies of derivation '/nix/store/rz34aq2d02kv73d13fzsipglzp6cdl6m-freebayes-1.3.8.drv' failed to build